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2026

• Oluwatosin Qawiyy Orababa, Jessica Furner-Pardoe, Alexander Gale, Blessing Anonye, Joe Ratcliff, Natasha Reddy, Ramón Garcia Maset, Niamh E. Harrington, Shajini Subhaskaran, Séamus Holden, Stephen P. Diggle, Christophe Corre, Freya Harrison (2026) Uncovering the multifaceted mechanism of action of a historical antimicrobial BioRxiv doi.org/10.64898/2026.02.02.703249

• Jenny L Littler, Niamh E Harrington, Dean Walsh, Ramón Garcia Maset, Saskia E. Bakker, Christopher Parmenter, Freya Harrison (2026) Biofilm-deficient mutants of Pseudomonas aeruginosa have wild-type levels of antibiotic tolerance in a model of cystic fibrosis lung infection. BioRxiv doi.org/10.64898/2026.02.17.706333

• Oluwatosin Qawiyy Orababa, Jessica Furner-Pardoe, Alexander Gale, Blessing Anonye, Joe Ratcliff, Natasha Reddy, Ramón Garcia Maset, Niamh E. Harrington, Shajini Subhaskaran, Séamus Holden, Stephen P. Diggle, Christophe Corre, Freya Harrison (2026) Uncovering the multifaceted mechanism of action of a historical antimicrobial. BioRxiv doi.org/10.64898/2026.02.02.703246

2025

• Vytautas Kontrimas, Gabriele Sosso, Robert Dallmann & Sebastien Perrier (2025) Machine learning assisted classification of cell and brain penetrating peptides. bioRxiv doi: .

• Alexandra Lovatt, Jack Butler, Nicholas Dale (2025) On the mechanisms of permselectivity of connexin hemichannels to small molecules BioRxiv

• Lumei Huang, Jack Butler, Alexandra Lovatt, Amol Bhandare, Julien Pelletier, Emily Lane-Hill, Nicholas Dale, Mark J. Wall (2025) CO2 sensitive connexin channel synapses in the VTA release 5HT to regulate dopaminergic neurons BioRxiV doi.org/10.1101/2025.04.14.648741
• Andreas Zaucker, Maria Papafoti, David Corcoran, DaeNia Shawn La Rode, Rebecca Leech, Pavle Vrljicak, Pooja Kumari, Karuna Sampath (2025) In toto imaging of germ plasm dynamics reveals an essential role for early distribution of germ granules in germline development BioRxiv

• Alexandra Lovatt, Ashvini Wijayapala, Macy Mui, Jack Butler, Nicholas Dale (2025) Connexin 50 hemichannels are opened by CO₂: implications for lens physiology. BioRxiv

• Valentin-Mihai Dospinescu, Alexander Mascarenhas, Jack Butler, Sarbjit Nijjar, Kyara de Oliveira Taborda, Sean Connors, Lumei Huang, Nicholas Dale (2025) CO2-dependent opening of Connexin 43 hemichannels BioRxiv 

• Will Scott, Vitaliia Polutranko, Ian Hands-Portman, Mohan K Balasubramanian (2025) Fluorescent protein tags for human tropomyosin isoform comparison. BioRxiv 

• Daniela M. Figiel, Randa Elsayed, Mark D. Walsh, Simaran Johal, Ying Lin, Till Bretschneider, Sascha Ott, Andrew C. Nelson (2025) BioRxiv

• Nicholas S Briggs, Kevin E Bruce, Stefano Camaione, Souvik Naskar, Adrian Lloyd, Malcolm E Winkler, David I Roper (2025) Regulation of the essential peptidoglycan hydrolytic complex FtsEX-PcsB during Streptococcus pneumoniae cell division. BioRxiv

• Catriona C. Conway, Tsvetelina Germanova, Sara Toral-Perez, Catherine Coates, Jonathon Pines, Nigel J. Burroughs, Andrew D. McAinsh (2025) Single kinetochores execute an ordered series of molecular events as the Spindle Assembly Checkpoint is silenced BioRxiv 

• Martin B.L. McAndrew, Jonathan Cook, Amy Gill, Kavya Sahoo, Clare Thomas, Phillip J. Stansfeld, Allister Crow (2025) Structure of YbbAP-TesA: a Type VII ABC transporter–lipid hydrolase complex. BioRxiv

• Lucien Hinderling, Hannah Heil…., Scott Brooks, ….., Rainer Pepperkok, Lukas C. Kapitein, Olivier Pertz, Nils Norlin, Aliaksandr Halavatyi, Rafael Camacho (2025). Smart Microscopy: Current Implementations and a Roadmap for Interoperability BioRxiv

• Yi Ting Loo, Juliet Chen, Ryan Harrison, Tiago Rito, Sophie Theis, Guillaume Charras, James Briscoe, Timothy E. Saunders (2025) Boundary constraints can determine pattern emergence BioRxiv 

• Lucas Stolle, Jai S Bolton, Rebecca Steventon, ….Kate Calliss, ….. Anita Milicic, Nicole C Robb, Craig P Thompson (2025) Divergent antibody-mediated population immunity to H5, H7 and H9 subtype potential pandemic influenza viruses. MedRxiv

• Mario A. Mendieta-Serrano, Yiqi Hou, Sophie Theis, Thomas E. Hall, Shannon E. Taylor, Berta Verd, Robert G. Parton, Timothy E. Saunders (2025) A structural transition ensures robust formation of skeletal muscle. BioRxiv

• Amol Bhandare, Adwoa Boaten, Dylan Dunkwu, Jade Hill, Biborka Balazs & Nicholas Dale (2025) Inflammation modifies breathing phenotype in mice with epilepsy. Researchgate

2024

• Scott Brooks, Sara Toral-Perez, David S Corcoran, Karl Kilborn, Brian Bodensteiner, Hella Baumann, Nigel J Burroughs, Andrew D McAinsh, Till Bretschneider (2024) CelFDrive: Artificial Intelligence assisted microscopy for automated detection of rare events BioRxiv doi: .

• Sophie Theis, Mario A Mendieta-Serrano, Bernardo Chapa-y-Lazo, Juliet Chen, Timothy E Saunders (2024) CellMet: Extracting 3D shape metrics from cells and tissues. BioRxiv

• Will Scott, Esther Ivorra-Molla, Dipayan Akhuli, Teresa Massam-Wu, Jonathan Cook, Lijiang Song, Masanori Mishima, Allister Crow, Mohan K. Balasubramanian (2024) StayRose: a photostable StayGold derivative red-shifted by genetic code expansion BioRxiv 

• Danielle Groves, Rory Cunnison, Andrew McMahon, Haitian Fan, Jane Sharps, Adrian Deng, Jeremy R Keown, Ervin Fodor, Nicole C Robb (2024) Mechanistic insights into the activity of SARS-CoV-2 RNA polymerase inhibitors using single-molecule FRET, BioRxiv doi: .
  
• Lindsey S. Marmont, Anna K. Orta, Robin A. Corey, David Sychantha, Ana Fernández Galliano, Yancheng E. Li, Becca W.A. Bailey, Neil G. Greene, Phillip J. Stansfeld, William M. Clemons Jr., Thomas G. Bernhardt. A feedback control mechanism governs the synthesis of lipid-linked precursors of the bacterial cell wall BioRxiv doi: .
• McIntyre I., Vasilyev V., Perrone CL., Dhami P., Panir K., Rosser M. & Greaves E. (2024). Preclinical testing of RRx-001 in mouse models of experimental endometriosis reveals promising therapeutic impacts. BioRxiv doi: .
• Bafna, A., Banks, G., Vasilyev, V., Dallmann, R., Hastings, MH. & Nolan, PM. (2024) Zinc finger homeobox-3 (ZFHX3) orchestrates genome-wide daily gene expression in the suprachiasmatic nucleus. BioRxiv .
• Johal, S., Elsayed, R., Panfilio, K.A., Andrew C. Nelson (2024) Identifying the molecular basis for functional divergence of duplicated SOX factors controlling endoderm formation and left-right patterning in zebrafish. BioRxiv
• Inman, A., Lutton, J.E., Spiritosanto, E., Tada, M., Bretschneider, T., Haas, P.A., Smutny, M. (2024) A multi-tiered mechanical mechanism shapes the early neural plate. BioRxiv

• Henlon, Y., Panir, P., McIntyre, I., Hogg, C., Dhami, P., Cuff, A.O., Senior, Moolchandani-Adwani, N., Courtois, E.T., Horne, A.W., Rosser, M., Ott, S., & Greaves, E., (2024) Single-cell analysis identifies distinct macrophage phenotypes associated with pro-disease and pro-resolving functions in the endometriotic niche. BioRxiv 

• Fesenko, M., Moore, D., Ewbank, P., & Royle, S.J. (2024) ATG9 vesicles are a subtype of intracellular nanovesicle BioRxiv

2023

• Vlachou D., Veretennikova M., Usselmann L., Vasilyev V., Ott S., Bjarnason GA., Dallmann R., Levi FA., Rand DA. (2023) TimeTeller: a tool to probe the circadian clock as a multigene dynamical system. bioRxiv, DOI: .
• Yean Ming Chew & Robert A. Cross (2023) Taxol acts differently on different tubulin isotypes. bioRxiv DOI:

• Esther Ivorra-Molla, Dipayan Akhuli, Martin B.L. McAndrew, William Scott, Lokesh Kumar, Saravanan Palani, Masanori Mishima, Allister Crow, Mohan K. Balasubramanian (2023) A monomeric StayGold fluorescent protein, Nature Biotechnology

• Hill, E., Huang, X., Del Popolo, I., La Mache, C., Lochner, M., Ladds, G., Frenguelli, B.G. and Wall, M.J. (2023) Species-dependent actions of the Goαb selective adenosine A₁ receptor agonist BnOCPA. BioRxiv

• Warren, M.T., Biggs, C,I,, Bissoyi A,, Gibson, M.I. and Sosso, G.C. (2023) Data-driven Discovery of Potent Small Molecule Ice Recrystallisation Inhibitors. ChemRxiv. DOI:

• Abid Ali, F.*, Zwetsloot, A.J.*, Stone, C.E., Morgan, T.E., Wademan, R.F., Carter, A.P.* and Straube, A.* (2023) KIF1C activates and extends dynein movement through the FHF cargo adaptor BioRxiv

2022

• Tailise Carlina de Souza-Guerreiro, Gaia Bondelli, Iago Grobas, Stefano Donini, Valentina Sesti, Chiara Bertarelli, Guglielmo Lanzani, Munehiro Asally & Giuseppe M Paterno (2022) Membrane Targeted Azobenzene Drives Optical Modulation of Bacterial Membrane Potential. bioRxiv, DOI: .
• Chelsea M Brown, Robin A. Corey, Ya Gao, Yeol Kyo Choi, Martine Gilleron, Nicolas Destainville, Elizabeth Fullam, Wonpil Im, Phillip James Stansfeld & Matthieu Chavent (2022) From Molecular Dynamics to Supramolecular Organization: The Role of PIM Lipids in the Originality of the Mycobacterial Plasma Membrane. bioRxiv, DOI: .
• Tomoyuki Hatano, Tzer Chyn Lim, Ingrid Billault-Chaumartin, Anubhav Dhar, Ying Gu, Teresa Massam-Wu, Sushmitha Adishesha, Luke Springall, Lavanya Sivashanmugam, William Scott, Masanori Mishima, Sophie G Martin, Snezhana Oliferenko, Saravanan Palani, Mohan K. Balasubramanian. mNeonGreen-tagged fusion proteins and nanobodies reveal localization of tropomyosin to patches, cables, and contractile actomyosin rings in live yeast cells. bioRxiv, DOI: .
• Lewis Taylor, Felix von Lendenfeld, Anna Ashton, Harshmeena Sanghani, Eric Tam, Laura Usselmann, Maria Verennetikova, Robert Dallmann, Jane McKeating, Sridhar Vasudevan & Aarti Jagannath (2022) Sleep and circadian rhythm disruption alters the lung transcriptome to predispose to viral infection. bioRxiv, DOI: .
• Harrington, NE, Allen, F, Garcia Maset, R & Harrison, F (2022) Pseudomonas aeruginosa transcriptome analysis in a cystic fibrosis lung model reveals metabolic changes accompanying biofilm maturation and increased antibiotic tolerance over time. BioRxiv

2021

• Sarah M. Smith, Gabrielle Larocque, Katherine M. Wood, Kyle L. Morris, Alan M. Roseman, Richard B. Sessions, Stephen J. Royle & Corinne J. Smith (2021) Multi-modal adaptor-clathrin contacts drive coated vesicle assembly, bioRxiv, DOI: .
• Nida Siddiqui, Daniel Roth, Algirdas Toleikis, Alexander J. Zwetsloot, Robert A. Cross, Anne Straube. Force generation of KIF1C is impaired by pathogenic mutations. BioRXiv, doi: .
• Rebekah A. Jones, Holly Shropshire, Caimeng Zhao, Andrew Murphy, Ian Lidbury, Tao Wei, David J Scanlan & Yin Chen. Phosphorus stress induces the synthesis of novel glycolipids in Pseudomonas aeruginosa that confer protection against a last-resort antibiotic. BioRXiv, DOI: .
• Ciearra B. Smith, Vincent van der Vinne, Eleanor McCartney, Adam C. Stowie, Tanya L. Leise, Blanca Martin-Burgos, Penny C. Molyneux, Lauren A. Garbutt, Michael H. Brodsky, Alec J. Davidson, Mary E. Harrington, Robert Dallmann & David R. Weaver. Cell-type specific circadian bioluminescence rhythms recorded from Dbp reporter mice reveal circadian oscillator misalignment. BioRXiv, DOI:.
• Thomas M Rawlings, Komal Makwana, Deborah M Taylor, Matteo A Mole, Katherine J Fishwick, Maria Tryfonos, Joshua Odendaal, Amelia Hawkes, Magdalena Zernicka-Goetz, Geraldine Hartshorne, Jan Brosens & Emma S Lucas. Modelling the impact of decidual senescence on embryo implantation in human endometrial assembloids. BioRXiv, DOI: .

2020

• Maria Diniz-da-Costa, Chow-Seng Kong, Katherine J Fishwick, Thomas Rawlings, Paul John Brighton, Amelia Hawkes, Joshua Odendaal, Siobhan Quenby, Sascha Ott, Emma S Lucas, Pavle S Vrljicak, Jan J Brosens (2020) Characterization of highly proliferative decidual precursor cells during the window of implantation in human endometrium. BioRxiv, DOI: .
• Larocque G., La-Borde GJ., Wilson BJ., Clarke NI., Moore DJ., Caswell PT. & Royle SJ. (2020) Intracellular nanovesicles mediate integrin trafficking during cell migration. BioRXiv, DOI: .
• Lanza B. & Parashar D. (2020) Do Support Vector Machines play a role in stratifying patient population based on cancer biomarkers? BioRXiv, doi: .
• Talbot CD., Walsh MD., Cutty SJ., Elsayed R., Bruce AEE., Wardle FC. & Nelson AC. (2020) Eomesodermin is functionally conserved between zebrafish and mouse in spite of different mutant phenotypic severities, and controls left/right organiser formation via interlocking feedforward loops. BioRXiv, DOI: .
• Amol Bhandare, Joseph van de Wiel, Reno Roberts, Ingke Braren, Robert Huckstepp & Nicholas Dale (2020) Analyzing the neuroglial brainstem circuits for respiratory chemosensitivity in freely moving mice. BioRXiv, DOI: .
• Iago Grobas, Marco Polin, Munehiro Asally (2020) Swarming bacteria undergo localized dynamic phase transition to form stress-induced biofilms. BioRXiv, DOI:.
• Joseph Van de Wiel, Louise Meigh, Amol Bhandare, Jonathan Cook, Sarbjit Nijjar, Robert Huckstepp, Nicholas Dale (2020) Connexin26 mediates CO2-dependent regulation of breathing via glial cells of the medulla oblongata. BioRXiv, DOI: .
• Mark J. Wall, Emily Hill, Robert Huckstepp, Kerry Barkan, Giuseppe Deganutti, Michele Leuenberger, Barbara Preti, Ian Winfield, Haifeng Wei, Wendy Imlach, Eve Dean, Cherise Hume, Stephanie Hayward, Jess Oliver, Fei-Yue Zhao, David Spanswick, Christopher A. Reynolds, Martin Lochner, Graham Ladds, Bruno G. Frenguelli (2020) A biased adenosine A1R agonist confers analgesia without cardiorespiratory depression. BioRXiv, DOI: .
• Alexander N. Baker, Sarah-Jane Richards, Collette S. Guy, Thomas R. Congdon, Muhammad Hasan, Alexander J. Zwetsloot, Anne Straube, Marc Walker, Simona Chessa, Giulia Pergolizzi, Simone Dedola, Robert Field, Matthew Gibson (2020) The SARS-COV-2 Spike Protein Binds Sialic Acids, and Enables Rapid Detection in a Lateral Flow Point of Care Diagnostic Device. ChemRxiv. DOI:

2019

• Charmet, J.; Rodrigues, R.; Yildirim, E.; Challa, P.K.; Roberts, B.; Dallmann, R. & Whulanza, Y. (2019) Low Cost Microfabrication Tool Box. Preprints, Accession Number: .
  
• Emanuele Roscioli, Tvetselina Germanova, Chris A. Smith, Peter A. Embacher, Muriel Erent, Amelia I. Thompson, Nigel J. Burroughs & Andrew D. McAinsh (2019) Ensemble-level organization of human kinetochores and evidence for distinct tension and attachment sensors. BioRxiv 685248, .

• Arnaud Kengmo Tchoupa, Rebekah A Jones, Agnes Kuroki, Mohammad Tauqeer Alam, Sebastien Perrier, Yin Chen & Meera Unnikrishnan (2019) The type VII secretion system protects Staphylococcus aureus against antimicrobial host fatty acids. BioRXiv, .

• Sylvain Durand, Adam Callan-Sidat, Josie McKeown, Stephen Li, Gergana Kostova, Juan R. Hernandez-Fernaud, Mohammad Tauqeer Alam, Andrew Millard, Chrystala Constantinidou, Ciarán Condon, Emma L. Denham (2019) Novel regulation from novel interactions: Identification of an RNA sponge that controls the levels, processing and efficacy of the RoxS riboregulator of central metabolism in Bacillus subtilis. BioRXiv, DOI: .
• Vlisidou, I., Hapeshi, A., Healey, J.R.J., Smart, K.,Yang G. & Waterfield, N.R. (2019) Photorhabdus Virulence Cassettes: extracellular multi-protein needle complexes for delivery of small protein effectors into host cells. BioRXiv, .

2018

• Nida Siddiqui, Alice Bachmann, Alexander James Zwetsloot, Hamdi Hussain, Daniel Roth, Irina Kaverina & Anne Straube (2018) Activation of intracellular transport by relieving KIF1C autoinhibition. BioRXiv, DOI: