Pre Prints
8. Enrichment of convergent metabolic functions in microbial communities through imposed and emergent environmental nichesAlberto Scarampi, Sarah J. N. Duxbury, Mary Coates, A. Murat Eren, Orkun S. Soyer Posted February 2026 bioRxiv | |
7. Asymmetric co-substrate usage at a metabolic branch point can drive overflow metabolismRobert West,Sonal, Tailise D.S.G. Rodrigues, Wenying Shou, Orkun S. Soyer Posted July 25, 2025 bioRxiv | |
6. Ammonia leakage can underpin nitrogen-sharing among soil microbesLuke Richards, Patrick Sch盲fer, Orkun S Soyer Posted April 08, 2024 bioRxiv | |
5. Emergence of synchronised growth oscillations in filamentous fungiPraneet Prakash, Xue Jiang, Luke Richards, Zoe Schofield, Patrick Schafer, Marco Polin, Orkun S. Soyer, Munehiro Asally Posted December 23, 2023; bioRxiv | |
4. Niche formation and metabolic interactions result in stable diversity in a spatially structured cyanobacterial communitySarah J.N. Duxbury, Sebastien Raguideau, Kelsey Cremin, Jerko Rosko, Mary Coates, Kieran Randall, Jing Chen, Christopher Quince, Orkun S. Soyer Posted February 08, 2024; bioRxiv | |
3. Novel microbial syntrophies identified by longitudinal metagenomics |
2. A low-cost DIY device for high resolution, continuous measurement of microbial growth dynamics.Kalesh Sasidharan, Andrea S Martinez-Vernon, Jing Chen, Tiantian Fu, Orkun SoyerPosted Sept 04, 2018 | |
1. Machine learning based prediction of functional capabilities in metagenomically assembled microbial genomes.Fred Farrell, Orkun S Soyer, Christopher Quince |