ࡱ> ;=:U@ 3bjbj ."3(P P P P ,| (h T T T T T T T qssssss$ZRT T T T T T T T T T qT q<6V@T $P V q00.4.((.lT T T T T T T (($L<((LMy favourite websites Literature: pubmed:  HYPERLINK "http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed" http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed Wos:  HYPERLINK "http://portal.isiknowledge.com/portal.cgi?DestApp=WOS&Func=Frame&Init=Yes&SID=W2LmmC@oOcdaH45Oj2G" http://portal.isiknowledge.com/portal.cgi?DestApp=WOS&Func=Frame&Init=Yes&SID=W2LmmC@oOcdaH45Oj2G Information on proteins: Expasy:  HYPERLINK "http://www.expasy.org/" http://www.expasy.org/ Also note the various links from the niceprot pages (eg cross-references to other databases, including structures, protein families etc.... and useful tools to analyse sequence data (right at the bottom, eg ProtParam etc.) Protein structures: EBI MSD:  HYPERLINK "http://www.ebi.ac.uk/msd/" http://www.ebi.ac.uk/msd/ There are many other sites, but this one has the nicest search interface Metal sites in proteins: MDB:  HYPERLINK "http://metallo.scripps.edu/" http://metallo.scripps.edu/ Info on protein NMR data: BioMagResBank:  HYPERLINK "http://www.bmrb.wisc.edu/" http://www.bmrb.wisc.edu/ Info on chemical elements: Webelements:  HYPERLINK "http://www.webelements.com/" http://www.webelements.com/ General source of information on biological and medical background: NCBI entrez:  HYPERLINK "http://www.ncbi.nlm.nih.gov/gquery/gquery.fcgi" http://www.ncbi.nlm.nih.gov/gquery/gquery.fcgi Programs and web interfaces Swiss pdb viewer: For looking at ("analysing") protein structures.  HYPERLINK "http://www.expasy.org/spdbv/" http://www.expasy.org/spdbv/ BLAST: Searching for homologous proteins, yields pairwise alignments and allows to retrieve sequence data Many different sites, but I tend to use the one at NCBI. ClustalW or ClustalX: allows multiple sequences alignments. Can be used through web or can be downloaded. jpred: Prediction of secondary structure.  HYPERLINK "http://www.compbio.dundee.ac.uk/~www-jpred/" http://www.compbio.dundee.ac.uk/~www-jpred/ Pretty pictures: MOLMOL, PovRAY (can be used in conjunction with swiss pdb viewer). #+,8oqrs! # $ % ԽԫȞԽԽԌȞԁxlԽh(J5h$6CJaJhE 6CJaJhE h$CJaJ#jUh(hE CJUaJh(hE 0JCJaJ#jh(hE CJUaJhE hE CJaJjhE CJUaJhE CJaJh(J5h(J56CJaJh(J5h$CJaJh(J5h$5CJaJ## z 2 { | T U  gd3 y z     / 0 1 2 z { | ̶̄|q_#jh(hE CJUaJh(J5hE CJaJh$CJaJ#j#h(hE CJUaJhE 6CJaJh(J5h$6CJaJh(J5h(J5CJaJh(J5h$CJaJhE hE CJaJhE CJaJh(hE 0JCJaJjhE CJUaJ#jRh(hE CJUaJ%    4 6 7 8 Q R S T U o p { } ~ ˿ޢޚˎqfhE h(J5CJaJ#jh(hE CJUaJh%jKh(J5CJaJh%jKh(J56CJaJh(J5CJaJ#jh(hE CJUaJh(J5h(J5CJaJh(J5h(J56CJaJhE hE CJaJh$CJaJhE CJaJh(hE 0JCJaJjhE CJUaJ#     ( V X Y Z 679:;@˹ӬˡweӬˋˋw]h$CJaJ#jh(hE CJUaJh(J5CJaJh(J5h$5CJaJh(J5h$CJaJh(J5h(J5CJaJhE h(J5CJaJh(hE 0JCJaJ#jh(hE CJUaJhE CJaJjhE CJUaJhE hE CJaJhE 6CJaJhE hE 6CJaJ# :;I23 HNqst123ڻکƜڔh$CJaJh(hE 0JCJaJ#j h(hE CJUaJhE hE CJaJjhE CJUaJh(J5CJaJhE CJaJh\CJaJh(J5h$CJaJh(J5hE CJaJ,1h. A!"#$% UDyK 8http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmedyK phttp://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmedDyK bhttp://portal.isiknowledge.com/portal.cgi?DestApp=WOS&Func=Frame&Init=Yes&SID=W2LmmC@oOcdaH45Oj2GyK http://portal.isiknowledge.com/portal.cgi?DestApp=WOS&Func=Frame&Init=Yes&SID=W2LmmC@oOcdaH45Oj2GDyK http://www.expasy.org/yK .http://www.expasy.org/DyK http://www.ebi.ac.uk/msd/yK 4http://www.ebi.ac.uk/msd/DyK http://metallo.scripps.edu/yK 8http://metallo.scripps.edu/DyK http://www.bmrb.wisc.edu/yK 4http://www.bmrb.wisc.edu/DyK http://www.webelements.com/yK 8http://www.webelements.com/1DyK /http://www.ncbi.nlm.nih.gov/gquery/gquery.fcgiyK ^http://www.ncbi.nlm.nih.gov/gquery/gquery.fcgiDyK http://www.expasy.org/spdbv/yK :http://www.expasy.org/spdbv/%DyK ,http://www.compbio.dundee.ac.uk/~www-jpred/yK Xhttp://www.compbio.dundee.ac.uk/~www-jpred/D@D NormalOJQJ^J_HmH sH tH DA@D Default Paragraph FontRiR  Table Normal4 l4a (k(No ListVV $ normaltext B*CJOJQJ^JaJphL^L Normal (Web)dd[$\$ B*ph6U@6 E Hyperlink >*B*ph3"#z2{|TU :;I2500000x0 0000x0 000x000 00 0x00 000 0x000000 00 00 000000#2{|TU:I5;00 ;00000000 ;0 0 ;0 0 ;0 000 ;00000 ;0000 ;00;00 ;00 ;00000 ;00z ;00 ;0000{ 3  3 3 +r$/7Q}Y6s3XXXXXXXXXX#)+%"$0278; RUYZ\p{}7;@ltINs$%(5#huz}1|SU9INs53333;I2502RU7;025Claudia Blindauermsreau uT6"OE,0C\e,0^`CJOJQJo(^`CJOJQJo(opp^p`CJOJQJo(@ @ ^@ `CJOJQJo(^`CJOJQJo(^`CJOJQJo(^`CJOJQJo(^`CJOJQJo(PP^P`CJOJQJo(^`OJPJQJ^Jo(-^`OJQJ^Jo(hHopp^p`OJQJo(hH@ @ ^@ `OJQJo(hH^`OJQJ^Jo(hHo^`OJQJo(hH^`OJQJo(hH^`OJQJ^Jo(hHoPP^P`OJQJo(hH^`OJPJQJ^Jo(-^`OJQJ^Jo(hHopp^p`OJQJo(hH@ @ ^@ `OJQJo(hH^`OJQJ^Jo(hHo^`OJQJo(hH^`OJQJo(hH^`OJQJ^Jo(hHoPP^P`OJQJo(hHC\e 6"OEf3        \\:<M"(J5%jKMY E jq-$Zo>#U@lq3p@UnknownGz Times New Roman5Symbol3& z Arial5& zaTahoma?5 z Courier New;Wingdings"1htt99!4//3QH ?:My favourite websitesClaudia Blindauermsreau   Oh+'0 $ @ L Xdlt|My favourite websites1y fClaudia BlindauertelaulauNormal msreau 2reMicrosoft Word 10.0@@@9՜.+,D՜.+,T hp  University of TV./{ My favourite websites Title 8@ _PID_HLINKSA<<i,,http://www.compbio.dundee.ac.uk/~www-jpred/Yhttp://www.expasy.org/spdbv/me/http://www.ncbi.nlm.nih.gov/gquery/gquery.fcgie,http://www.webelements.com/http://www.bmrb.wisc.edu/# http://metallo.scripps.edu/V  http://www.ebi.ac.uk/msd/8>http://www.expasy.org/ubhttp://portal.isiknowledge.com/portal.cgi?DestApp=WOS&Func=Frame&Init=Yes&SID=W2LmmC@oOcdaH45Oj2Gwl8http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed  !"#$%&'()+,-./013456789<Root Entry Fb$>Data 1TableFWordDocument."SummaryInformation(*DocumentSummaryInformation82CompObjj  FMicrosoft Word Document MSWordDocWord.Document.89q